PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334855.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 365aa MW: 41582.2 Da PI: 6.547

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	68	90	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_027334855.1 68 CSyeGCGKTFIDAGALRKHSHIH 90 77779**************7766 PP
2	zf-C2H2	15.9	3.8e-05	95	119	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk F ++s LkrH H XP_027334855.1 95 FVCHyeGCGKKFLDSSKLKRHFLIH 119 89*******************8877 PP
3	zf-C2H2	17.8	9.1e-06	162	186	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_027334855.1 162 HICPypDCGKRYAHEYKLKNHIASH 186 679999*****************96 PP
4	zf-C2H2	13	0.0003	225	250	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+++ H XP_027334855.1 225 YACPyeGCEKAYIHEYKLKLHLKReH 250 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
METHFNHTLF DRRPFLKSKA PAVKWVKEWV PQDVVATEDT IKALKEKEKE PSAPEPEPEP 60 TTEVLFLCSY EGCGKTFIDA GALRKHSHIH GERQFVCHYE GCGKKFLDSS KLKRHFLIHT 120 GERDFVCPHE GCGKVINLSI VAFSLDFNLR SHMKTHSQEN YHICPYPDCG KRYAHEYKLK 180 NHIASHHEKN ASVDMAKYTP PSEKQTKATK PSGGTYGSAS SDRPYACPYE GCEKAYIHEY 240 KLKLHLKREH PGHDENAVHA LANADNEMDE ASDQDAYGAK RSNGKSQKQN KPKPNLKLPP 300 SKISQRKGSV PTPAALNVIK KPWPVKEETY DEDSEETEED RDNVEDGWRY AGNNEDDDEE 360 TEYED

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

METHFNHTLF DRRPFLKSKA PAVKWVKEWV PQDVVATEDT IKALKEKEKE PSAPEPEPEP  60
TTEVLFLCSY EGCGKTFIDA GALRKHSHIH GERQFVCHYE GCGKKFLDSS KLKRHFLIHT  120
GERDFVCPHE GCGKVINLSI VAFSLDFNLR SHMKTHSQEN YHICPYPDCG KRYAHEYKLK  180
NHIASHHEKN ASVDMAKYTP PSEKQTKATK PSGGTYGSAS SDRPYACPYE GCEKAYIHEY  240
KLKLHLKREH PGHDENAVHA LANADNEMDE ASDQDAYGAK RSNGKSQKQN KPKPNLKLPP  300
SKISQRKGSV PTPAALNVIK KPWPVKEETY DEDSEETEED RDNVEDGWRY AGNNEDDDEE  360
TEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.3	1e-136	C2H2 family protein