PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335046.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 843aa    MW: 93405 Da    PI: 6.4179
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.64.7e-23128229199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027335046.1 128 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFI--WNE 218
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027335046.1 219 KNQLLLGIRRA 229
                     9999****997 PP
2Auxin_resp118.94.1e-39254337183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k+ ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_027335046.1 254 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 337
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    
MKLSTSGLGQ QGHEGGEKKC LNSELWHACA GPLVSLPNAG TRVVYFPQGH SEQVAATTNR  60
EIDGHIPNYP SLPPQLICQL HNVTMHADIE TDEVYAQMTL QPLTPQEQKD TFLPMELGIP  120
SKQPSNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA RDLHDVEWKF  180
RHIFRGQPKR HLLTTGWSIF VSAKRLVAGD SVLFIWNEKN QLLLGIRRAN RPQTVMPSSV  240
LSSDSMHIGL LAAAAHAAAT NSCFTVFYNP RASPSEFVIP LSKYIKAVYH TRISVGMRFR  300
MLFETEESSV RRYMGTITGI SDLDSVRWPN SHWRSVKVGW DESTAGERQP RVSLWEIEPL  360
TTFPMYPSLF PLRLKRPWHP GSSSLNDGRD EANGLMWLRG GPVDQGLNSI NFQGAGMLPW  420
MQQRLDPTLL GGNDPNQQYQ AMLAAGLQNL GSGYHMKQQM MSFQQPFPYL QQSGNNNSPL  480
QLQQQQAIQQ SGSSNILQPH AQIMGENLSQ HLLQKPHNNQ EVQTQQQQHT YQETLLIPSD  540
QLHQRQHSSI PSPSYSKPDF LDSSIKFPTS VSPGQNVLSS LCPEGSGSLL NLSRSSQSLL  600
TEQLPQQSWT PKYAPLQVNA FGSTVPHAQY SGKDSAMVLP HCNSDAQNPT LFGVNIDSSG  660
LLLPTTVPGY TTSSADTDSS TMPLAESGFQ GSLYACMQDS SELLRSAGHV DPHNQTQTFV  720
KVYKSGSVGR SLDISRFSSY HELREELAQM FGIEGKLEDP LRSGWQLVFV DRENDVLLLG  780
DDPWESFVNN VWYIKILSPE DIQKMGEQAV ESLALGSGQR LNGTGAESQD IVSGPPSIGS  840
LEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein