PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335068.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 209aa MW: 24728.4 Da PI: 10.1405

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.7	1e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_027335068.1 9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFSS 59 79***********************************************96 PP
2	K-box	65.6	1.7e-22	85	172	12	99
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++++ + + k++e L+ ++R+llGe+L+++sl eLqqLe+qLe+sl+kiR++Kn+l+++ ie+l++ ek l eenk+Lr++ + XP_027335068.1 85 ENTQHVKDGDISMVKKLEHLEVSKRKLLGEELDTCSLDELQQLENQLERSLNKIRARKNQLFRQRIEKLKEEEKFLLEENKRLRQQCQ 172 4566666666678899*********************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MVRGKTQMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFSSS 60 SINKTVERYQ RKIKDLGLST KGIQENTQHV KDGDISMVKK LEHLEVSKRK LLGEELDTCS 120 LDELQQLENQ LERSLNKIRA RKNQLFRQRI EKLKEEEKFL LEENKRLRQQ CQIERQRSFS 180 IQDVELVTEK RGEEVETELF IGRPERRMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11880.1	2e-63	MIKC_MADS family protein