PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335074.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

YABBY

Protein Properties

Length: 215aa MW: 23862.2 Da PI: 8.1628

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	247.4	2.8e-76	12	179	2	170
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesast 94 ++ s s+q+Cyv+CnfC+t+lavsvP tslfk+vtvrCGhCt+llsvn++ a + hl++s+ + llee +++ + +++++ + +++ XP_027335074.1 12 QHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHSFFTPqnLLEEIRNAPS-TNMMMNQLPNPND 105 67899***************************************99999999889999999998766335555555443.3444444444444 PP YABBY 95 svsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 v s ++ + ee+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl XP_027335074.1 106 LVMS-TM-RGGPEETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 179 4444.43.6778999*********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MSASSTSFSP DQHLSPSDQL CYVHCNFCDT VLAVSVPCTS LFKTVTVRCG HCTNLLSVNM 60 RGLLLPAANQ LHLGHSFFTP QNLLEEIRNA PSTNMMMNQL PNPNDLVMST MRGGPEETPK 120 PPSANRPPEK RQRVPSAYNR FIKDEIQRIK AGNPDISHRE AFSAAAKNWA HFPHIHFGLM 180 PDHQPVKKAN VRQEAEDVLM KDGFFAPANV GVSPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	1e-100	YABBY family protein