PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335309.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 329aa MW: 35820.1 Da PI: 8.6729

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.3	1.6e-41	161	238	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC +ls+ak+yhr+h+vCe hsk+p v++sgl +rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+q+ XP_027335309.1 161 ICQVEGCGLNLSSAKDYHRKHRVCESHSKSPRVVISGLDRRFCQQCSRFHALSEFDDKKRSCRRRLSDHNARRRKPQP 238 5**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEWNAKSLGQ WDWEHFFLNT KATDGEADGE INVGALYPSG GSACSGSELI HASSSRSSKS 60 ASNNSSSNGD SKISSILTLE GSQDDSSGKK ELCKGEAIET SPAAEPSSVS GEPLLTLKLG 120 KRFYFEDVCT ASDSKKASSF EVPISSGKKC RANNQNLQHP ICQVEGCGLN LSSAKDYHRK 180 HRVCESHSKS PRVVISGLDR RFCQQCSRFH ALSEFDDKKR SCRRRLSDHN ARRRKPQPEA 240 VQLNPSVLSS SPYAIDGRQI MSPFAFSRSA TNLAWQDIHC SKLPQTKDFL PKPAKAFNKI 300 PNIVAMLSDD SSGLLTSKDI ATKSIVPGC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	235	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	6e-57	SBP family protein