PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335364.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 510aa MW: 55843.4 Da PI: 9.0423

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027335364.1 86 FICEICNKGFQRDQNLQLHRRGH 108 89*******************88 PP
2	zf-C2H2	12.1	0.0006	162	184	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027335364.1 162 WKCDKCSKKYAVQSDWKAHSKTC 184 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MKMKGLMFQQ QVVEENMSNL TSASGEASAS SGNRTEIGTS YPQQYLVQPQ TQTPPAKKKR 60 NLPGNPDPDA EVIALSPKSL LATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTSK 120 EVRKKVYVCP EPSCVHHDPS RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH 180 SKTCGTREYR CDCGTLFSRR DSFITHRAFC DALAEESARA ITGTTSQPSS SHHHHMNLQT 240 QFNPQDLHGF PLKIEQQQQS FNLRPEIVPP WLGPPTVDLS SSSSIFSTNQ EFSHQENPNP 300 SLGPTLATYR AVPNPSPHMS ATALLQKAAQ MGATMSRTGS SPAMIRPHMQ THVSSSADSG 360 NISSGNFGLN LSSREDTSTS TTATTTTSAT TVFGHGLSPL GNKAAVSSAP TLLHDVINSF 420 SNPSAFEGTP FEDPFGGILN SKKDDNLHLH DTFSKTNTTT HLATAAGGNE GLTRDFLGLR 480 PLSHTDILSI AGIGNCINDQ QNQSQKQWQG

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MKMKGLMFQQ QVVEENMSNL TSASGEASAS SGNRTEIGTS YPQQYLVQPQ TQTPPAKKKR  60
NLPGNPDPDA EVIALSPKSL LATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTSK  120
EVRKKVYVCP EPSCVHHDPS RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH  180
SKTCGTREYR CDCGTLFSRR DSFITHRAFC DALAEESARA ITGTTSQPSS SHHHHMNLQT  240
QFNPQDLHGF PLKIEQQQQS FNLRPEIVPP WLGPPTVDLS SSSSIFSTNQ EFSHQENPNP  300
SLGPTLATYR AVPNPSPHMS ATALLQKAAQ MGATMSRTGS SPAMIRPHMQ THVSSSADSG  360
NISSGNFGLN LSSREDTSTS TTATTTTSAT TVFGHGLSPL GNKAAVSSAP TLLHDVINSF  420
SNPSAFEGTP FEDPFGGILN SKKDDNLHLH DTFSKTNTTT HLATAAGGNE GLTRDFLGLR  480
PLSHTDILSI AGIGNCINDQ QNQSQKQWQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	125	KLKQRTSKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-115	C2H2 family protein