PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335415.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 381aa MW: 43126.6 Da PI: 5.2118

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00081	5	27	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C +sFs+ L H+r+H XP_027335415.1 5 HKCKLCFRSFSNGRALGGHMRSH 27 79********************9 PP
2	zf-C2H2	13.5	0.00021	254	276	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H XP_027335415.1 254 YKCETCNKVFRSYQALGGHRASH 276 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MMEKHKCKLC FRSFSNGRAL GGHMRSHMMN LTLAKPEEES SRTVQLSFEA ESASSSSSSE 60 DEQGNNDDDK GLCYGLRENP KRSIRLVDPE FSFAAADTGC VILQDRESET ESSKNNPTRR 120 RSKRAWKLGV FDSKYHHHHH NKKQGGDVEH EAILKKKVKF CKDSKTSWVD HEPASSVSDA 180 TTEEDVAVCL MMLSRDKWKR QKDQLMEDQF EEEEEEEEED DDEEEEDDDE RSLEESDESQ 240 EMMKLCKNRV QGRYKCETCN KVFRSYQALG GHRASHKKIK VNLSVDDDEA EVERGKKGGT 300 CAVEKKIHEC PVCFRVFASG QALGGHKRTH VTGSANTTVL PISTKLGNSF IDLNLPAPID 360 DDDASQFENS AVSDAEFVKT R

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MMEKHKCKLC FRSFSNGRAL GGHMRSHMMN LTLAKPEEES SRTVQLSFEA ESASSSSSSE  60
DEQGNNDDDK GLCYGLRENP KRSIRLVDPE FSFAAADTGC VILQDRESET ESSKNNPTRR  120
RSKRAWKLGV FDSKYHHHHH NKKQGGDVEH EAILKKKVKF CKDSKTSWVD HEPASSVSDA  180
TTEEDVAVCL MMLSRDKWKR QKDQLMEDQF EEEEEEEEED DDEEEEDDDE RSLEESDESQ  240
EMMKLCKNRV QGRYKCETCN KVFRSYQALG GHRASHKKIK VNLSVDDDEA EVERGKKGGT  300
CAVEKKIHEC PVCFRVFASG QALGGHKRTH VTGSANTTVL PISTKLGNSF IDLNLPAPID  360
DDDASQFENS AVSDAEFVKT R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	159	RRSKRAWKLGVFDSKYHHHHHNKKQGGDVEHEAILKKKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-64	C2H2 family protein