PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335493.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 197aa    MW: 22795.5 Da    PI: 8.8746
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.4e-191562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +l ++++ +G ++Wkt+a + g++R++k+c++rw++yl
   XP_027335493.1 15 RGTWTPEEDRKLSQCIQIHGAKRWKTVAVKSGLNRCGKSCRLRWLNYL 62
                     89********************************************97 PP
2Myb_DNA-binding53.55.4e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ + eE++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l
   XP_027335493.1  68 RGNISNEEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113
                      78999*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MAPKNDGASK RTMNRGTWTP EEDRKLSQCI QIHGAKRWKT VAVKSGLNRC GKSCRLRWLN  60
YLRPNIKRGN ISNEEEDLIV RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLCKKVNQK  120
EEKEETSKTT EKTIPQNQNY GDNSATFENE ETIIGSGNSD VSFDVNEFFN FSEGPYGYDW  180
VNKYLELDHI PESTQKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G40330.14e-50MYB family protein