PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335587.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16294.9 Da PI: 10.3892

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90	1.2e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +i+fsstgkl++y+s XP_027335587.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIVFSSTGKLHDYAS 59 8***********************************************86 PP
2	K-box	66.3	1.1e-22	81	141	9	69
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++ + +q+e+a L+++++ Lq+ +R+l+Ge+L+ L +keLq+Le+qLe slk +R kK XP_027335587.1 81 NPASEVKFWQTEAASLRQQLQYLQECHRQLMGEELSGLGIKELQNLENQLEMSLKGVRMKK 141 567889******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIVFSS TGKLHDYAST 60 SMKSVIERFN KLKEEQHQLM NPASEVKFWQ TEAASLRQQL QYLQECHRQL MGEELSGLGI 120 KELQNLENQL EMSLKGVRMK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	3e-77	MIKC_MADS family protein