PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335599.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 207aa    MW: 23872.2 Da    PI: 8.7961
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.42.8e-26959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqvtfskRr+g++KKA+ELS+LCdae+a+i+fs t kl+ey+s
  XP_027335599.1  9 KKIDNINARQVTFSKRRKGLFKKAQELSTLCDAEIALIVFSATSKLFEYAS 59
                    689**********************************************86 PP
2K-box40.41.2e-1481170998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     ++ ++++  +  ++ L+ke+e   +e+ +l Ge+L+ L++ eLq+Le+ L++  ++i + K+e +l++i++l+ ke el+eenk+L++ +
  XP_027335599.1  81 QCIEQQQLGSDSYDMLRKEVEDKAHELSRLNGEELQGLTIAELQKLEELLQRRWTTISKIKDEKILQEINHLKTKEAELKEENKKLKQSF 170
                     5566777788999**************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MTRKKIPIKK IDNINARQVT FSKRRKGLFK KAQELSTLCD AEIALIVFSA TSKLFEYASS  60
SIQQTIEKRN RHAMIQGLEN QCIEQQQLGS DSYDMLRKEV EDKAHELSRL NGEELQGLTI  120
AELQKLEELL QRRWTTISKI KDEKILQEIN HLKTKEAELK EENKKLKQSF VQEQRQSYES  180
ITCSSSDHPP DYGSSDTSLK LGLPAFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-38MIKC_MADS family protein