PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335649.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 475aa MW: 51275.8 Da PI: 7.776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.8	1.2e-15	300	345	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_027335649.1 300 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 345 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSQCVPSWDV DDNPPPPRVS LRSNSNSTAP DVPMLDYDVA ELTWENGQLS MHGLGLPRVP 60 LKPSTTTNNK YTWEKPRASG TLESIVNQAT SLPERGKDGS AAGANTEGGY GNLLVPWFDP 120 RRATAAAAAA SNNTMTMDAL VPCSNRSEEQ SNHAMDSNPR GVGTCMVDCS TRVGSCCGNH 180 GEGAVLAAAK RAKVAHVPVG GHEMSGRDQS VSGSATFGRD SKHVTLDTCD REFDMGFTST 240 SIGSLENTSS AKQCTKTTTV DEHDSVSHSK PREDGDEEKK KKGNEKSSVS TKRSRAAAIH 300 NQSERKRRDK INQRMKTLQK LVPNSSKTDK ASMLDEVIEY LKQLQAQVQM MNRINMSSMI 360 LPLTMQQQLQ MSMMSPMGIG MGMGMGMGMG MDMNSLNRAN IPGIPPVLHP SAFMPMPAWD 420 AAAGDRLQGT PATVMPDPLS TFFGCQSQPM TMDAYSRIAA MYQQLHQPHG SGSKN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSQCVPSWDV DDNPPPPRVS LRSNSNSTAP DVPMLDYDVA ELTWENGQLS MHGLGLPRVP  60
LKPSTTTNNK YTWEKPRASG TLESIVNQAT SLPERGKDGS AAGANTEGGY GNLLVPWFDP  120
RRATAAAAAA SNNTMTMDAL VPCSNRSEEQ SNHAMDSNPR GVGTCMVDCS TRVGSCCGNH  180
GEGAVLAAAK RAKVAHVPVG GHEMSGRDQS VSGSATFGRD SKHVTLDTCD REFDMGFTST  240
SIGSLENTSS AKQCTKTTTV DEHDSVSHSK PREDGDEEKK KKGNEKSSVS TKRSRAAAIH  300
NQSERKRRDK INQRMKTLQK LVPNSSKTDK ASMLDEVIEY LKQLQAQVQM MNRINMSSMI  360
LPLTMQQQLQ MSMMSPMGIG MGMGMGMGMG MDMNSLNRAN IPGIPPVLHP SAFMPMPAWD  420
AAAGDRLQGT PATVMPDPLS TFFGCQSQPM TMDAYSRIAA MYQQLHQPHG SGSKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	309	ERKRRD
2	305	310	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-105	bHLH family protein