PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335699.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 613aa MW: 67469.8 Da PI: 6.1785

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5.1e-13	447	493	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_027335699.1 447 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 493 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MKVEVGLGGL WNEDEKAMVV EVLGSSAFDY LVVNSVSNEN LLMAFGSGEN LQNKLSDLVE 60 RPNVSNFSWN YAIFWQISQS KYGEWVLGWG DGCCREPREG EEGGGVRGVL NLCVEDENQQ 120 RMRKRVLQKL HTTFGGSDED NYAFGLDRVT DTEMFFLASM YFSFPSGHGG PGKCFASGKH 180 LWLSDVLKST SDYCVRSFLA KSAGIQTIVL VPTDLGVVEM GSVRMVGESF ELLQVVKSVF 240 SAQSSFSAVK PIAPLDVVNE KRDENGLLSG LAIGDNNSNS ESHNGNRVEG IGVHKIFGQD 300 LNCMNQFREK LAVRKMEDRS WGGHTNGNSI SFPNGIHGSS LGGGRVARQP GPIEIFTPRS 360 STSNVPELAN GGRVGFMHDK YQQQRQVQMQ IDFSGAMSRP SVGSVIAESE LSDVEASCKE 420 EKPSVADDRR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS 480 LLGDAIAYIN ELQAKLKTME SEREQFGSTS RDGSVLEANS RAENHHNRAP DVDIQAAQDG 540 VIVNVSCPID VHPVSKVIQT LKEAEIGVVE SKLTAANDTV LHNFVIKTQG HEYLTKEKLV 600 ALISRESNSL QPL

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MKVEVGLGGL WNEDEKAMVV EVLGSSAFDY LVVNSVSNEN LLMAFGSGEN LQNKLSDLVE  60
RPNVSNFSWN YAIFWQISQS KYGEWVLGWG DGCCREPREG EEGGGVRGVL NLCVEDENQQ  120
RMRKRVLQKL HTTFGGSDED NYAFGLDRVT DTEMFFLASM YFSFPSGHGG PGKCFASGKH  180
LWLSDVLKST SDYCVRSFLA KSAGIQTIVL VPTDLGVVEM GSVRMVGESF ELLQVVKSVF  240
SAQSSFSAVK PIAPLDVVNE KRDENGLLSG LAIGDNNSNS ESHNGNRVEG IGVHKIFGQD  300
LNCMNQFREK LAVRKMEDRS WGGHTNGNSI SFPNGIHGSS LGGGRVARQP GPIEIFTPRS  360
STSNVPELAN GGRVGFMHDK YQQQRQVQMQ IDFSGAMSRP SVGSVIAESE LSDVEASCKE  420
EKPSVADDRR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS  480
LLGDAIAYIN ELQAKLKTME SEREQFGSTS RDGSVLEANS RAENHHNRAP DVDIQAAQDG  540
VIVNVSCPID VHPVSKVIQT LKEAEIGVVE SKLTAANDTV LHNFVIKTQG HEYLTKEKLV  600
ALISRESNSL QPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	429	437	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-164	bHLH family protein