PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335924.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 677aa MW: 75349.7 Da PI: 6.5129

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76	4.2e-24	127	227	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f kvlt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + +++ XP_027335924.1 127 FSKVLTASDTSTHGGFSVLRKHATEClpaldMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGDNG 219 88**************************977777888*********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_027335924.1 220 ELRVGVRR 227 99**98 PP
2	Auxin_resp	96.7	3.5e-32	253	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ v+k+++a+++kv vGmRfkm+fe++ds+e rr+sGt+vgv+d++p +W nSkWrsLk XP_027335924.1 253 ASHAVATQTLFVVYYKPRT--SQFIIAVNKYLEAMDNKVGVGMRFKMRFEGDDSAEtdRRFSGTIVGVEDISP-HWINSKWRSLK 334 789*************6..9****************************8744788******99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MLNRGSNVSA EVVGSGESEN ELYEQLWKAC AGPLVDVPRV GQRVFYFPQG HMEQLEASTN 60 QELNQRIPLL KLPTKILCRV VNVHLLAEQE TDEVYAQITL VPESNQDEPT SPDPCTTELP 120 RPPVHSFSKV LTASDTSTHG GFSVLRKHAT ECLPALDMSQ PTPTQELVAK DLHGYEWRFK 180 HIFRGQPRRH LLTTGWSTFV TSKRLVAGDT FVFLRGDNGE LRVGVRRLSR QASSMPSSVI 240 SSQSMHLGVL ATASHAVATQ TLFVVYYKPR TSQFIIAVNK YLEAMDNKVG VGMRFKMRFE 300 GDDSAETDRR FSGTIVGVED ISPHWINSKW RSLKVQWDEP SAVPRPDRVS PWEIEPFVAS 360 SSTPSVQPTA VKTKRARPTS EIPDVDTTSA ASVYWDAGLK QVDMTQLNVL AESKRSDSTG 420 MWHHKQADMN SKSNCSGTML RNQTEGSWLS SPHSSCLSHL FQDATDDKSA SAWPVSKPNS 480 SRLNNDNVFD QVDKENKVEN AMSYRLFGID LIDHSRNSPA VEKASTHAVN APRIIADGCA 540 STLSRTDTGH KSDASPKESQ SKQICRSRTK VQMQGVAVGR AVDLTMLDGY DQLIHELEDM 600 FDIKGQLKHR NKWEIVFTDD EGDMMLVGDD PWPEFCNMVR RIFICSSQDV KKMSSGSKLP 660 ISSVEEGTVI SSDTTET

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MLNRGSNVSA EVVGSGESEN ELYEQLWKAC AGPLVDVPRV GQRVFYFPQG HMEQLEASTN  60
QELNQRIPLL KLPTKILCRV VNVHLLAEQE TDEVYAQITL VPESNQDEPT SPDPCTTELP  120
RPPVHSFSKV LTASDTSTHG GFSVLRKHAT ECLPALDMSQ PTPTQELVAK DLHGYEWRFK  180
HIFRGQPRRH LLTTGWSTFV TSKRLVAGDT FVFLRGDNGE LRVGVRRLSR QASSMPSSVI  240
SSQSMHLGVL ATASHAVATQ TLFVVYYKPR TSQFIIAVNK YLEAMDNKVG VGMRFKMRFE  300
GDDSAETDRR FSGTIVGVED ISPHWINSKW RSLKVQWDEP SAVPRPDRVS PWEIEPFVAS  360
SSTPSVQPTA VKTKRARPTS EIPDVDTTSA ASVYWDAGLK QVDMTQLNVL AESKRSDSTG  420
MWHHKQADMN SKSNCSGTML RNQTEGSWLS SPHSSCLSHL FQDATDDKSA SAWPVSKPNS  480
SRLNNDNVFD QVDKENKVEN AMSYRLFGID LIDHSRNSPA VEKASTHAVN APRIIADGCA  540
STLSRTDTGH KSDASPKESQ SKQICRSRTK VQMQGVAVGR AVDLTMLDGY DQLIHELEDM  600
FDIKGQLKHR NKWEIVFTDD EGDMMLVGDD PWPEFCNMVR RIFICSSQDV KKMSSGSKLP  660
ISSVEEGTVI SSDTTET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein