PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335926.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 666aa MW: 74222.5 Da PI: 6.5126

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76	4.1e-24	116	216	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f kvlt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + +++ XP_027335926.1 116 FSKVLTASDTSTHGGFSVLRKHATEClpaldMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGDNG 208 88**************************977777888*********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_027335926.1 209 ELRVGVRR 216 99**98 PP
2	Auxin_resp	96.7	3.5e-32	242	323	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ v+k+++a+++kv vGmRfkm+fe++ds+e rr+sGt+vgv+d++p +W nSkWrsLk XP_027335926.1 242 ASHAVATQTLFVVYYKPRT--SQFIIAVNKYLEAMDNKVGVGMRFKMRFEGDDSAEtdRRFSGTIVGVEDISP-HWINSKWRSLK 323 789*************6..9****************************8744788******99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MVGSGESENE LYEQLWKACA GPLVDVPRVG QRVFYFPQGH MEQLEASTNQ ELNQRIPLLK 60 LPTKILCRVV NVHLLAEQET DEVYAQITLV PESNQDEPTS PDPCTTELPR PPVHSFSKVL 120 TASDTSTHGG FSVLRKHATE CLPALDMSQP TPTQELVAKD LHGYEWRFKH IFRGQPRRHL 180 LTTGWSTFVT SKRLVAGDTF VFLRGDNGEL RVGVRRLSRQ ASSMPSSVIS SQSMHLGVLA 240 TASHAVATQT LFVVYYKPRT SQFIIAVNKY LEAMDNKVGV GMRFKMRFEG DDSAETDRRF 300 SGTIVGVEDI SPHWINSKWR SLKVQWDEPS AVPRPDRVSP WEIEPFVASS STPSVQPTAV 360 KTKRARPTSE IPDVDTTSAA SVYWDAGLKQ VDMTQLNVLA ESKRSDSTGM WHHKQADMNS 420 KSNCSGTMLR NQTEGSWLSS PHSSCLSHLF QDATDDKSAS AWPVSKPNSS RLNNDNVFDQ 480 VDKENKVENA MSYRLFGIDL IDHSRNSPAV EKASTHAVNA PRIIADGCAS TLSRTDTGHK 540 SDASPKESQS KQICRSRTKV QMQGVAVGRA VDLTMLDGYD QLIHELEDMF DIKGQLKHRN 600 KWEIVFTDDE GDMMLVGDDP WPEFCNMVRR IFICSSQDVK KMSSGSKLPI SSVEEGTVIS 660 SDTTET

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MVGSGESENE LYEQLWKACA GPLVDVPRVG QRVFYFPQGH MEQLEASTNQ ELNQRIPLLK  60
LPTKILCRVV NVHLLAEQET DEVYAQITLV PESNQDEPTS PDPCTTELPR PPVHSFSKVL  120
TASDTSTHGG FSVLRKHATE CLPALDMSQP TPTQELVAKD LHGYEWRFKH IFRGQPRRHL  180
LTTGWSTFVT SKRLVAGDTF VFLRGDNGEL RVGVRRLSRQ ASSMPSSVIS SQSMHLGVLA  240
TASHAVATQT LFVVYYKPRT SQFIIAVNKY LEAMDNKVGV GMRFKMRFEG DDSAETDRRF  300
SGTIVGVEDI SPHWINSKWR SLKVQWDEPS AVPRPDRVSP WEIEPFVASS STPSVQPTAV  360
KTKRARPTSE IPDVDTTSAA SVYWDAGLKQ VDMTQLNVLA ESKRSDSTGM WHHKQADMNS  420
KSNCSGTMLR NQTEGSWLSS PHSSCLSHLF QDATDDKSAS AWPVSKPNSS RLNNDNVFDQ  480
VDKENKVENA MSYRLFGIDL IDHSRNSPAV EKASTHAVNA PRIIADGCAS TLSRTDTGHK  540
SDASPKESQS KQICRSRTKV QMQGVAVGRA VDLTMLDGYD QLIHELEDMF DIKGQLKHRN  600
KWEIVFTDDE GDMMLVGDDP WPEFCNMVRR IFICSSQDVK KMSSGSKLPI SSVEEGTVIS  660
SDTTET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein