PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335927.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 631aa MW: 70233.1 Da PI: 6.3172

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.2	3.8e-24	127	227	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f kvlt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + +++ XP_027335927.1 127 FSKVLTASDTSTHGGFSVLRKHATEClpaldMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGDNG 219 88**************************977777888*********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_027335927.1 220 ELRVGVRR 227 99**98 PP
2	Auxin_resp	96.8	3.2e-32	253	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ v+k+++a+++kv vGmRfkm+fe++ds+e rr+sGt+vgv+d++p +W nSkWrsLk XP_027335927.1 253 ASHAVATQTLFVVYYKPRT--SQFIIAVNKYLEAMDNKVGVGMRFKMRFEGDDSAEtdRRFSGTIVGVEDISP-HWINSKWRSLK 334 789*************6..9****************************8744788******99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MLNRGSNVSA EVVGSGESEN ELYEQLWKAC AGPLVDVPRV GQRVFYFPQG HMEQLEASTN 60 QELNQRIPLL KLPTKILCRV VNVHLLAEQE TDEVYAQITL VPESNQDEPT SPDPCTTELP 120 RPPVHSFSKV LTASDTSTHG GFSVLRKHAT ECLPALDMSQ PTPTQELVAK DLHGYEWRFK 180 HIFRGQPRRH LLTTGWSTFV TSKRLVAGDT FVFLRGDNGE LRVGVRRLSR QASSMPSSVI 240 SSQSMHLGVL ATASHAVATQ TLFVVYYKPR TSQFIIAVNK YLEAMDNKVG VGMRFKMRFE 300 GDDSAETDRR FSGTIVGVED ISPHWINSKW RSLKVQWDEP SAVPRPDRVS PWEIEPFVAS 360 SSTPSVQPTA VKTKRARPTS EIPDVDTTSA ASVYWDAGLK QVDMTQLNVL AESKRSDSTD 420 DKSASAWPVS KPNSSRLNND NVFDQVDKEN KVENAMSYRL FGIDLIDHSR NSPAVEKAST 480 HAVNAPRIIA DGCASTLSRT DTGHKSDASP KESQSKQICR SRTKVQMQGV AVGRAVDLTM 540 LDGYDQLIHE LEDMFDIKGQ LKHRNKWEIV FTDDEGDMML VGDDPWPEFC NMVRRIFICS 600 SQDVKKMSSG SKLPISSVEE GTVISSDTTE T

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MLNRGSNVSA EVVGSGESEN ELYEQLWKAC AGPLVDVPRV GQRVFYFPQG HMEQLEASTN  60
QELNQRIPLL KLPTKILCRV VNVHLLAEQE TDEVYAQITL VPESNQDEPT SPDPCTTELP  120
RPPVHSFSKV LTASDTSTHG GFSVLRKHAT ECLPALDMSQ PTPTQELVAK DLHGYEWRFK  180
HIFRGQPRRH LLTTGWSTFV TSKRLVAGDT FVFLRGDNGE LRVGVRRLSR QASSMPSSVI  240
SSQSMHLGVL ATASHAVATQ TLFVVYYKPR TSQFIIAVNK YLEAMDNKVG VGMRFKMRFE  300
GDDSAETDRR FSGTIVGVED ISPHWINSKW RSLKVQWDEP SAVPRPDRVS PWEIEPFVAS  360
SSTPSVQPTA VKTKRARPTS EIPDVDTTSA ASVYWDAGLK QVDMTQLNVL AESKRSDSTD  420
DKSASAWPVS KPNSSRLNND NVFDQVDKEN KVENAMSYRL FGIDLIDHSR NSPAVEKAST  480
HAVNAPRIIA DGCASTLSRT DTGHKSDASP KESQSKQICR SRTKVQMQGV AVGRAVDLTM  540
LDGYDQLIHE LEDMFDIKGQ LKHRNKWEIV FTDDEGDMML VGDDPWPEFC NMVRRIFICS  600
SQDVKKMSSG SKLPISSVEE GTVISSDTTE T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein