PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335976.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 242aa MW: 27817.8 Da PI: 4.7861

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.5e-19	37	88	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++f++eq++ Le++Fe ++ + +++ +LA+ lgL+ rqV +WFqN+Ra++k XP_027335976.1 37 RRFSDEQIKSLESMFETESRLEPRKKLQLARDLGLQPRQVAIWFQNKRARWK 88 58*************************************************9 PP
2	HD-ZIP_I/II	117.7	6.6e-38	36	126	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 rr+s+eq+k+LE++Fe+e++Lep++K +lar+Lglqprqva+WFqn+RAR+k+kqlE++y+ L+++y++l+++ e+L+ke+++L +l++ XP_027335976.1 36 TRRFSDEQIKSLESMFETESRLEPRKKLQLARDLGLQPRQVAIWFQNKRARWKSKQLEREYSILQANYNNLASRFEALKKEKQTLLIQLQK 126 79***********************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MLDSMEYTYS AEAETYTSSS STPSTAMRKK KNNNNTRRFS DEQIKSLESM FETESRLEPR 60 KKLQLARDLG LQPRQVAIWF QNKRARWKSK QLEREYSILQ ANYNNLASRF EALKKEKQTL 120 LIQLQKLNDL IQKPLEQSQR CAQVKGANSM DSESENGGTM KCEAEVKPSP SMERSEHAHG 180 VLSDDDTSIK VEYFGLEDEP GLLNFAEHGD GSLTSPEDWG TFESDDLLGQ SSSDYQWWDF 240 WS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	1e-71	HD-ZIP family protein