PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336069.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 333aa MW: 35548.1 Da PI: 9.8331

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.9	1.8e-38	67	180	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.....sec......eaesssssasns 85 + k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a + ++ ss ++++n+ XP_027336069.1 67 PQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAiamsvN-GtlkiptTSPSSTNNNNNN 160 57999***********************************************************77777443331.0233322222222222223 PP TCP 86 ssgkaaksaakskksqksaa 105 ++++ ++ ++++kk++k++a XP_027336069.1 161 NNTDPEPGDPPEKKKRKRPA 180 33344444443333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MAEEPSQDVD LRLGEPKGPK EEPETEEGSP STAAIRVMPV AVHVPAGMSM SMQVNKALAQ 60 AQAQAQPQKR ASTKDRHTKV EGRGRRIRMP ATCAARIFQL TRELGHKSDG ETIRWLLEHA 120 EPAIIAATGT GTVPAIAMSV NGTLKIPTTS PSSTNNNNNN NNTDPEPGDP PEKKKRKRPA 180 NSAYVDINDA AVSVSAGLTT SNQNAATIPQ QSAIPLPQGM VPMWAIPSNA VVPAAGAFFV 240 VPQTPSFQHQ PQFFTIARPI SAFVSSMVTP VQLQPTSAST TTPSSTAPAR ATVMAPTTTA 300 TTTTSTTQML RDFSLEIYDK QELQFMSRSS SKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	179	EKKKRKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-63	TCP family protein