PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336104.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 369aa MW: 40483.3 Da PI: 10.2352

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.3	1.3e-15	69	155	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++ +qCk++++ ++k+yk +k+ + ++s++p+f++l+ XP_027336104.1 69 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVsgreDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAG---ATSKWPFFERLD 155 7***********************************854334444556779*************99986...6779****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MDDDDEIQSH PSPASGSPAS SPRANGRITV TVAAPAPQTQ PAPNSLALAL PIQQQPKGNG 60 GGGGGREDCW SEGATAVLID AWGERYLELS RGNLKQKHWK EVAEIVSGRE DYTKAPKTDI 120 QCKNRIDTVK KKYKSEKAKI AAGATSKWPF FERLDQLIGP TAKIPGAAGT SAVGNSNLPL 180 QKVPLAIPVG GRGGANQFHP QKQQQQQPQQ VQLKNQKIQF RRRAPPVDSD SSEREPPSPV 240 SSDSFPPESY ERKRPRVMNS NAVKGKEGGK KGKGWGSAVR ELTQAILKFG EAYEQAESSK 300 LQQVVEMEKQ RMKFAKDLEL QRMQFFMKTQ LEISQLKLER KGGNPSNHHS TTTPNNNNNN 360 HHNNNSDSE

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MDDDDEIQSH PSPASGSPAS SPRANGRITV TVAAPAPQTQ PAPNSLALAL PIQQQPKGNG  60
GGGGGREDCW SEGATAVLID AWGERYLELS RGNLKQKHWK EVAEIVSGRE DYTKAPKTDI  120
QCKNRIDTVK KKYKSEKAKI AAGATSKWPF FERLDQLIGP TAKIPGAAGT SAVGNSNLPL  180
QKVPLAIPVG GRGGANQFHP QKQQQQQPQQ VQLKNQKIQF RRRAPPVDSD SSEREPPSPV  240
SSDSFPPESY ERKRPRVMNS NAVKGKEGGK KGKGWGSAVR ELTQAILKFG EAYEQAESSK  300
LQQVVEMEKQ RMKFAKDLEL QRMQFFMKTQ LEISQLKLER KGGNPSNHHS TTTPNNNNNN  360
HHNNNSDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	1e-51	Trihelix family protein