PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336125.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 322aa MW: 35327.3 Da PI: 8.9824

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336125.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.1	4e-41	178	255	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq++gC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk q+ XP_027336125.1 178 RCQAQGCNADLSDAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKIQQ 255 6**************************************************************************886 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MLDYEWGNPS TIILAGNEGA AATDTDQTHR QIFDHNYTSL SNPFLHGSTL TATPFSHHHH 60 FNPPQPHQHQ HHPFFDPRAF SGASATSFSP SPSMLSLNPI PPISASHCGL GPGSGLGLLL 120 MPKSEDFTPP VDFQASGLGL NLGGRTYFAS CNDDIVNRLC RRAKTVESVP TMLSNLPRCQ 180 AQGCNADLSD AKHYHRRHKV CEFHSKAATV VAAGLTQRFC QQCSRFHLLS EFDNGKRSCR 240 KRLADHNRRR RKIQQPTQEI QKSQPPLDNI ASTTTWSSSE SGIQSSSSVK VGLSPPDYFR 300 RSPYQNRGSS TSSSGSLLFS SG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	9e-70	SBP family protein