PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336620.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 176aa    MW: 19709.5 Da    PI: 7.4062
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.11.7e-39111101100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+l+r+C ++C++apyf +++ kkfa vhk+FGasnv+k+l ++pee+red+++sl+yeAear+rdPvyG++g i  lq+++ +l+++la
  XP_027336620.1  11 SCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLA 105
                     6*********************************************************************************************9 PP

          DUF260  96 llkee 100
                      +k++
  XP_027336620.1 106 IAKDR 110
                     99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MKSYEPRSSS SCAACKLLKR RCIPNCIFAP YFRSDECKKF AKVHKVFGAS NVSKILIEVP  60
EEQREDTVNS LAYEAEARLR DPVYGCIGAI ALLQRKMVEL QHDLAIAKDR LARCHAAASA  120
ATNPSPDILL AHVSLPPFPD FSTSTDFNDI FCHSSSSQLL NRHETVDDFN QIPYIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.12e-64LBD family protein