PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336643.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 300aa MW: 32962.7 Da PI: 7.421

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.8	2.1e-19	138	192	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k XP_027336643.1 138 RKKLRLSKEQAMVLEETFKEHNTLNPKQKQALAKQLNLMPRQVEVWFQNRRARTK 192 788899***********************************************98 PP
2	HD-ZIP_I/II	126.2	1.4e-40	138	227	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LEe+F+e+++L+p++K++la++L+l prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_027336643.1 138 RKKLRLSKEQAMVLEETFKEHNTLNPKQKQALAKQLNLMPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 227 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGENHDDGLG LGLSLSLGFG ENASNQPNFN MHKPPQSVPN QRASLSNLFH FHDRSAETRS 60 FLRGIDVNSA ATAAPVACDD ENGVSSPNST ISSISGKRCE REGNGDENER ASCSRGGSED 120 DDGGGCGGDG DGDGDTSRKK LRLSKEQAMV LEETFKEHNT LNPKQKQALA KQLNLMPRQV 180 EVWFQNRRAR TKLKQTEVDC EYLKRCCENL TEENRRLQKE VQELRALKLS PQLYMHMNPP 240 TTLTMCPSCE RVAVSSTSSS SATMPSSPAL VNRNPLGPTI QRPVPVNPWA AMSIQHRTRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	143	SRKKLRL
2	187	195	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	3e-86	HD-ZIP family protein