PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336683.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 279aa MW: 32334.8 Da PI: 5.0758

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.2	6.8e-16	23	112	2	85
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt+qe+ +Li+a++e++ +l+rg l++++Weev+ ++ ++s+ qC++k+e+l++r+++ k+++ s ++y + + XP_027336683.1 23 WTHQETVHLIRAYQEKWYSLKRGPLRQNQWEEVAVVVaarcgyDLNHPSKSALQCRHKMEKLRQRHRADKKHRLTTPTAPASAWQYSSLM 112 ***********************************8666653334479****************9999887644444477776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MATPSSPQND AASPSKKPQP IPWTHQETVH LIRAYQEKWY SLKRGPLRQN QWEEVAVVVA 60 ARCGYDLNHP SKSALQCRHK MEKLRQRHRA DKKHRLTTPT APASAWQYSS LMDELERGPL 120 PISALAPSRN DSDDDFDDND TNPHENDERE RESYIKSKSI NHIVSHSQRP MRTKERLVYY 180 DDIGDDDEDD DDDDDDEDDE YDDGGDDGVL GLTAEMRAFA ERFIGMENLK MEMMKETERC 240 RLEMEKKRIQ MILESQRRIV DSIGRVFGSS KRIKIGQQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	4e-35	Trihelix family protein