PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336824.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 486aa    MW: 55472.9 Da    PI: 9.6548
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.71.1e-09459479526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     lCr+++r G+C++Gd+CkF H+
  XP_027336824.1 459 LCRHYSR-GWCRFGDNCKFLHD 479
                     9******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MATKDSPLQL PELSIQSEES DTGSDWDNSE KGPDYDLLEE TQINFSNLSL KKAKARIVKD  60
KGLCSETAPE AIDVTASFVD EEGYEKVQKI IEAGLLEKLK VDECKVYLRK HGLRLTGNKD  120
TLLQRIKEHL EILNGGGEKK YPRFSFVLNC KGDACTGDVV LFEQNVYEMF NIASRSASGP  180
PCGKRIVAGR IVKESYGAAK QQHTFTIEVL WSKGEKPLPP LYPLLIKGRN LYRLKTLRQK  240
WEDEAKRLKI LMEKHSRGSF ARADREARIQ EKEKRKTNME NRVSKQVSVK NQCQSHSHVT  300
MSPYQPQERN VSINPEKSEF PSQNSGLSAN IRKEACVIVN KPAAVTEQHG MSFDSKTVAM  360
RSDQLASSGR TSFTHHIHNQ QTWKHPSDYR STFAIDHMRG AELGANYNYV DLHSREKPTF  420
IEKNQNLVQT TWKAHHMPLA NANQVHPLMP NRSYKPNQLC RHYSRGWCRF GDNCKFLHDF  480
RGKRNA