PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336849.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 385aa MW: 44044.3 Da PI: 9.3598

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00018	128	151	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C Cg+ F +++ L++H + H XP_027336849.1 128 YLCRVCGRKFYTNEKLVNHFKQlH 151 56*****************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MVSILKFRSI FFITLESTSG LTYGASRHCH FASEDWGKNP KLIPNEKPNR VGLFWDLDNK 60 PPNSIPPYEV ANKLRVAASS FGVVRYTVAY ANSHTFSHVP QVVRERRKER QLLNRLENKG 120 VIKPNEPYLC RVCGRKFYTN EKLVNHFKQL HEREHVKRMN RIESARGSRR VKLVAKYSMK 180 MEKYKKAASA VLTPKVGYGL ADELKRAGFW VQTVLDKPQA ADLALKSHMV DIMDHRRVEC 240 VVLVSDDSDF VDVIKEARLR CLKTVVIGDT DDGVLKRTAD AAFSWEEILM GKAKKEAVSV 300 VKNWKDRDIL KRLEWSYNPD VDKKKLNLED TIAESFEDGN MDDICGEADD AHKDDKGSWW 360 ELDSDDDVPN GQSSKLSILS VNRRS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MVSILKFRSI FFITLESTSG LTYGASRHCH FASEDWGKNP KLIPNEKPNR VGLFWDLDNK  60
PPNSIPPYEV ANKLRVAASS FGVVRYTVAY ANSHTFSHVP QVVRERRKER QLLNRLENKG  120
VIKPNEPYLC RVCGRKFYTN EKLVNHFKQL HEREHVKRMN RIESARGSRR VKLVAKYSMK  180
MEKYKKAASA VLTPKVGYGL ADELKRAGFW VQTVLDKPQA ADLALKSHMV DIMDHRRVEC  240
VVLVSDDSDF VDVIKEARLR CLKTVVIGDT DDGVLKRTAD AAFSWEEILM GKAKKEAVSV  300
VKNWKDRDIL KRLEWSYNPD VDKKKLNLED TIAESFEDGN MDDICGEADD AHKDDKGSWW  360
ELDSDDDVPN GQSSKLSILS VNRRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	326	KRLEWSYNPDVDKKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-135	C2H2 family protein