PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336864.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

NF-YA

Protein Properties

Length: 358aa MW: 39319.2 Da PI: 9.4896

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	84.6	1.5e-26	177	257	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekk.......................ldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep+YVNaKQy++Il+RRq Rakle ++k ++ + +pylheSRh hAl+R+RgsgGrF XP_027336864.1 177 DEPIYVNAKQYHAILRRRQYRAKLEVQNKlikerkvsalfffplpskvislnNSDICLQPYLHESRHLHALKRARGSGGRF 257 79*********************************************988556789********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MKNLSKKDSG SAHLTSYALG CSSWGTSSES NVQQSSMSKN LTLKMSVLPH QCHKTKPMNF 60 QFQDQDSSST QSTGQSYPEV GSAQSGQISV QYSNSSACST LNKTGEKSVA GLIRSSVGSQ 120 DFTFPPSQLG HNQSFVHTAF HHGEPCFSGL LATPYRPEPN LIGMTPMRIP LPLALSDEPI 180 YVNAKQYHAI LRRRQYRAKL EVQNKLIKER KVSALFFFPL PSKVISLNNS DICLQPYLHE 240 SRHLHALKRA RGSGGRFLNT KNLQESKLVS GRDVSGCTQL NLCGKISESK VHAVENYRDG 300 ASTTTCSDVT SASNSDDLFR QHESDFRLCG YPSNIGRNIQ GFSADFGGGN KHHLPVLM

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MKNLSKKDSG SAHLTSYALG CSSWGTSSES NVQQSSMSKN LTLKMSVLPH QCHKTKPMNF  60
QFQDQDSSST QSTGQSYPEV GSAQSGQISV QYSNSSACST LNKTGEKSVA GLIRSSVGSQ  120
DFTFPPSQLG HNQSFVHTAF HHGEPCFSGL LATPYRPEPN LIGMTPMRIP LPLALSDEPI  180
YVNAKQYHAI LRRRQYRAKL EVQNKLIKER KVSALFFFPL PSKVISLNNS DICLQPYLHE  240
SRHLHALKRA RGSGGRFLNT KNLQESKLVS GRDVSGCTQL NLCGKISESK VHAVENYRDG  300
ASTTTCSDVT SASNSDDLFR QHESDFRLCG YPSNIGRNIQ GFSADFGGGN KHHLPVLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72830.2	4e-58	NF-YA family protein