PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336940.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 239aa MW: 24712.9 Da PI: 8.015

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.2	1.8e-40	27	127	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++C++apyf +eq + +fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael XP_027336940.1 27 PCGACKFLRRKCVPGCIFAPYFDSEQgATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAEL 121 7*********************9989***************************************************************** PP DUF260 95 allkee 100 ++l+ + XP_027336940.1 122 SYLQGH 127 *99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MSINSSCSGS GGGSSSGGGS NSGGGSPCGA CKFLRRKCVP GCIFAPYFDS EQGATHFAAV 60 HKVFGASNVS KLLLNIPVHK RLDAVVTICY EAQARLRDPV YGCVAHIFAL QQQVVSLQAE 120 LSYLQGHLAT LELPQPPPPS SPQATIAPPV ISIADLPSAP ASTVPATYDL SSLFDPMAQN 180 SSWAMQQRPI DPRQYLGSGP SASSGSGGDL QALARELLHR HGSAPVACSN PSSSHSLSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	2e-84	LBD family protein