PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336998.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 237aa MW: 26588.7 Da PI: 8.1219

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H XP_027336998.1 63 FSCNFCKREFSSSQALGGHQNAH 85 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MVIKGNEKDP KSELHHTSNS NTRLLLDFMK LSKDETVREQ SSNVVGDSES VDDENTKIEA 60 KTFSCNFCKR EFSSSQALGG HQNAHKQERA LAKRRQGLEA GGFGHFPCYP YPTLYNTHSY 120 YGGPYNRALG VRMDSMIHKN SWASHEFRND HIWSRKGQEI LNSSLFDPIL KKDASPSLRV 180 EADNGTRETL SLFEIIATNS SSQLINPTLA IKGSDDHPIP KQTSKATSFN LDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25160.1	4e-21	C2H2 family protein