PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337318.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 346aa MW: 38805.6 Da PI: 6.5016

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_027337318.1 14 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	48.5	2.1e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ XP_027337318.1 67 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD 120 AVPPLATFSD IHSPYNIASM ESFFPLTANP NMILNFHHHP ADQLYLPSPS PILQGFDHNN 180 DIKLDINNYN ANFLHIQNPI PETLPPLSNP SSYDDTWSLG CVALHLNPNQ ENQISKSDST 240 PHYVVDKFIN PTALQQYECH LVETIAPKVS ESIEDYVCSI PYSSTSQDQH EASAKFQSNQ 300 QDLTVVANQL EYIDALMSSL PSSTTSSSVS SSQIVTNPII PSGWET

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD  120
AVPPLATFSD IHSPYNIASM ESFFPLTANP NMILNFHHHP ADQLYLPSPS PILQGFDHNN  180
DIKLDINNYN ANFLHIQNPI PETLPPLSNP SSYDDTWSLG CVALHLNPNQ ENQISKSDST  240
PHYVVDKFIN PTALQQYECH LVETIAPKVS ESIEDYVCSI PYSSTSQDQH EASAKFQSNQ  300
QDLTVVANQL EYIDALMSSL PSSTTSSSVS SSQIVTNPII PSGWET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	4e-82	MYB family protein