PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337347.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 238aa    MW: 27081.7 Da    PI: 8.8575
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.71.7e-192268147
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                    k++e ks+r+vtfskR+ g++ K  ELS+LC ae a+i+ s++gkly
  XP_027337347.1 22 KKVEQKSRRHVTFSKRKLGLFNKLTELSILCHAETALIVTSQNGKLY 68
                    5789******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MASNGATTSA KPKTIRRKIE IKKVEQKSRR HVTFSKRKLG LFNKLTELSI LCHAETALIV  60
TSQNGKLYSC GYPDADAVIR RYLTGASPQC GSKRKQQELT ESLRLEYEAS QNHLLEEKTR  120
LQEIKEESEK NSFGFSSWWN HSIEDMSLDN LEQFKSSLEG LKLNLVAAVQ NEKLAVVQND  180
KFNCEFPPLP LAVVPPPQLP NSLIQRLSEH QVHDYWNSGG DGIDYLPFKF PRSSFAHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-25M-type_MADS family protein