PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337506.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 230aa    MW: 26386.2 Da    PI: 5.46
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.48.7e-191159351
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    i n+s+r+ t+ kR+ng++KK  E+S+LC++e++ ii+s++++l  ++s
  XP_027337506.1 11 IANESKRKATLKKRKNGLIKKIDEISTLCGIEACAIIYSPNDELDVWPS 59
                    89*******************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MTRKKVELTY IANESKRKAT LKKRKNGLIK KIDEISTLCG IEACAIIYSP NDELDVWPSE  60
LGVQRVLSRF KSMSEHEQGK KMLNQESFLS QSIIKAQEQL KKQKNENRKK EMSNLMFECL  120
NTGKICDNAS MIDLNDLSWL IDQNLKEIER NMSRMQIQEV TPIIENGGET MNGGQQVNMD  180
NVQVPETNMD NMQRQHWTSE FINGVVGDDM LLPFGDVNIQ NGLFPNPYIP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVELTYIANESKRKATLKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-47M-type_MADS family protein