PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337539.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 190aa    MW: 21173.8 Da    PI: 5.1926
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260120.21.1e-377104197
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC++dCv+apyf  +q + +fa+vhk+FGasnv++ll +lp ++r+da+ ++ +eA ar++dP+yG+v++i +lqqq+++l++e+
  XP_027337539.1   7 SCGACKFLRRKCTRDCVFAPYFSYDQaATSFAAVHKVFGASNVSRLLLHLPMQNRSDAAITISFEALARMQDPIYGCVAHIYALQQQVASLQEEI 101
                     6***********************99789****************************************************************98 PP

          DUF260  95 all 97 
                       l
  XP_027337539.1 102 GIL 104
                     765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTGFGSSCGA CKFLRRKCTR DCVFAPYFSY DQAATSFAAV HKVFGASNVS RLLLHLPMQN  60
RSDAAITISF EALARMQDPI YGCVAHIYAL QQQVASLQEE IGILGNLMEN TTVGVDNCSS  120
GLVNPNNGLE YVLTQNDYHT LDREMNREFP NANELEDHLD PNSAEKFLSG IDQEFFLNHP  180
WFKHSNGIIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.16e-59LBD family protein