PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337693.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 336aa MW: 38311.1 Da PI: 8.3597

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.2	4e-25	82	126	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e XP_027337693.1 82 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 126 79****************************************985 PP
2	QLQ	56.5	8.3e-20	16	52	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT++Q+q+L++Q+l++Ky++ + P+Pp+L++ i++ XP_027337693.1 16 SPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKR 52 89*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MMSASASASA SARNRSPFTP TQWQELEQQA LVFKYMVTGT PIPPDLIFSI KRSLDSSISS 60 RLFPHHPIGW GCFEMGFGRK VDPEPGRCRR TDGKKWRCSK EAYPDSKYCE RHMHRGRNRS 120 RKPVEVSSTT TTATNPSSQS YNRNLSLTNP NITSPSSFPF SPLPSSIPCE SQPFSQSYQN 180 PFFYSQSTSS RPPDSDFPPQ DATTHHLFMD SGSYSQDEKD YRHVHGIRES VDERAFFPEA 240 SGSARSYPDS YQNLSMSSYK SYSNSSFQNM NDNPRQQEQQ QQHCFVLGTD FKSTRPSKEK 300 ETETSQRPLH HFFGEWPPKN TDSWLDLASN SRIQTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	9e-58	GRF family protein