PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337775.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 211aa MW: 23067.3 Da PI: 8.0825

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	126.4	1.4e-39	15	115	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +kll ++p ++r da+ +l+yeA arardPvyG+vg++++lqqq+++l+ael XP_027337775.1 15 PCGACKFLRRKCVKGCIFAPYFDSDQgTAHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAEL 109 7*********************9989***************************************************************** PP DUF260 95 allkee 100 +++++ XP_027337775.1 110 TYVQAR 115 *99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MDCGGKIGGG ERSGPCGACK FLRRKCVKGC IFAPYFDSDQ GTAHFAAVHK VFGASNASKL 60 LMRIPVHKRL DAVVTLCYEA LARARDPVYG CVGHLFALQQ QVMNLQAELT YVQARLATMQ 120 RLPVTVAPLT LPQSSSPTSL HSSSDHLPSS ADMQSVSMHF DSLQQHSTSL ELSSFFNPSE 180 QQLEDGELQA LAREFVSRYL PGVRFQPSNP H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	4	10	GGKIGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00210.1	1e-74	LBD family protein