PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337955.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 354aa MW: 39935.1 Da PI: 5.8456

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.3	1.7e-13	14	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg WT+eEd + + v ++G+ +W++++ + g++R++k+c+ rw + XP_027337955.1 14 RGVWTPEEDPKMLSFVSKHGSSNWTSVPIKAGLKRCGKSCRIRWSNN 60 899*****************************************986 PP
2	Myb_DNA-binding	44.4	3.8e-14	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++Tt+E++l++++++ G++ W+ Ia+ ++ g+t++++k++w++ XP_027337955.1 68 DNFTTQEEDLIIKLHAAIGSR-WSIIAQQIP-GKTDNDVKNYWNT 110 68*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MVRSPCYEKF NAKRGVWTPE EDPKMLSFVS KHGSSNWTSV PIKAGLKRCG KSCRIRWSNN 60 LKLDLKHDNF TTQEEDLIIK LHAAIGSRWS IIAQQIPGKT DNDVKNYWNT KLKKKLSQMG 120 IDPVTHKPFS KLIADYGNIG ECQKPSTRIG SVNKDFKNAM ILKSEPHQAL PQGFGNFLDQ 180 PKQLLTSPPK EEILGSNFLF NRNHNDIDNF PTQLPHLQAI PIVTSASNGI DFENETILTS 240 LLGEGCLSKT SSPSTSTCFT SGQEELPVPF SWNDFLLEDA FIPPSDNQEE EMVSQVENVM 300 RQSWNMKEVL SQQASTSDVH FSSSSNISFV EAMLDQENEM FLSFPHLMEE PSNY

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MVRSPCYEKF NAKRGVWTPE EDPKMLSFVS KHGSSNWTSV PIKAGLKRCG KSCRIRWSNN  60
LKLDLKHDNF TTQEEDLIIK LHAAIGSRWS IIAQQIPGKT DNDVKNYWNT KLKKKLSQMG  120
IDPVTHKPFS KLIADYGNIG ECQKPSTRIG SVNKDFKNAM ILKSEPHQAL PQGFGNFLDQ  180
PKQLLTSPPK EEILGSNFLF NRNHNDIDNF PTQLPHLQAI PIVTSASNGI DFENETILTS  240
LLGEGCLSKT SSPSTSTCFT SGQEELPVPF SWNDFLLEDA FIPPSDNQEE EMVSQVENVM  300
RQSWNMKEVL SQQASTSDVH FSSSSNISFV EAMLDQENEM FLSFPHLMEE PSNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	4e-64	MYB family protein