PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338139.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 438aa MW: 48012.1 Da PI: 7.8867

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.6	9.3e-18	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_027338139.1 55 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.9	3.4e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_027338139.1 54 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MASSNRHWPS MFKSKPCNPH HQWQHDINSS LISTGCHRSP YTSGAGCEER SPEPKPRWNP 60 KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL 120 QNSKNHNPET QQNPVSIPQI TAPSSSSSSS EKSPPKEMIP TKVFSIGFSN VTDMVPNSPT 180 NSVNQTYFQT QNETTLLSPA PPPATSAVAE AYFFPVQHHG HGVVLPSAVT SQGFCFSELS 240 NVVQAQSHGQ HNVGPCTSLL LSEIISHGAA ASKKDLDQDK SLKIMHQPSQ LNFCVSHTTT 300 APTTATVVPP ITATTTTVPS PVIAHVLQGV GDPAVTPRST VFINDMAFEV AVGPFNVREA 360 FGDDAVLIHA TGQPVLTNQW GITLQSLQHG ACYYLRVSDF AVTWMEVMFG LERTIIQHIG 420 VVVPCFVATS PTKDEGVR

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MASSNRHWPS MFKSKPCNPH HQWQHDINSS LISTGCHRSP YTSGAGCEER SPEPKPRWNP  60
KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL  120
QNSKNHNPET QQNPVSIPQI TAPSSSSSSS EKSPPKEMIP TKVFSIGFSN VTDMVPNSPT  180
NSVNQTYFQT QNETTLLSPA PPPATSAVAE AYFFPVQHHG HGVVLPSAVT SQGFCFSELS  240
NVVQAQSHGQ HNVGPCTSLL LSEIISHGAA ASKKDLDQDK SLKIMHQPSQ LNFCVSHTTT  300
APTTATVVPP ITATTTTVPS PVIAHVLQGV GDPAVTPRST VFINDMAFEV AVGPFNVREA  360
FGDDAVLIHA TGQPVLTNQW GITLQSLQHG ACYYLRVSDF AVTWMEVMFG LERTIIQHIG  420
VVVPCFVATS PTKDEGVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-66	WOX family protein