PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338253.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 707aa    MW: 79565.8 Da    PI: 6.4729
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.66e-202580156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q+ +Le+ F ++++p++ +r+++Ak+lgL  +qVk+WFqN+R+++k
  XP_027338253.1 25 KKTYHRHTSDQTARLEAIFSECPHPDEGQRRQIAKELGLAPKQVKFWFQNKRTQKK 80
                    689999***********************************************998 PP
2START129.44.2e-412254435206
                     HHHHHHHHHHHHC-TT-EEEE.......EXCCTTE...EEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   5 eaaqelvkkalaeepgWvkss.......esengde...vlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                      a ++l+k+ +a+ep+W kss         en++e   +   fe sk+ ++e ++ s++v   +++lv  lld++ +W++ ++    ka tlev+
  XP_027338253.1 225 NAKEQLLKLLAANEPLWIKSStdrrfvlHPENYEElfpRANHFENSKG-RVESSKGSRIVRIKAMQLVDMLLDSR-KWTNLFPtiitKARTLEVL 317
                     5678999*******************9977777772334677888888.**************************.*******9*********** PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173
                     ++g      gal lm  e+ +lsplvp R+f +vRy++q +ag w+++dvSv+  ++++ + s+ +   lpSg++i++ sng ++v+wvehv+l+
  XP_027338253.1 318 ENGslenrsGALLLMHGEMHVLSPLVPsREFFIVRYCEQVEAGIWMVADVSVEYMKENNPNLSFWK---LPSGCMIHEISNGSCQVFWVEHVELD 409
                     *****************************************************9988887999998...************************** PP

                     SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 174 grlp.hwllrslvksglaegaktwvatlqrqcek 206
                     +++  h+l+r l++ ++a ga +w+  lqr ce+
  XP_027338253.1 410 ENVQtHQLYRDLINGSIAYGAERWLMELQRMCER 443
                     ***99***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    
MDVSMGAAAG GSGDEHENQN PQKGKKTYHR HTSDQTARLE AIFSECPHPD EGQRRQIAKE  60
LGLAPKQVKF WFQNKRTQKK TQGERADNNA LRVENERMLK ENRLIKEALK TIICPSCGGP  120
PYGDEEHTLK QLRLENTRLK AERENVSKLL AKYLENPMVE PELELATTGS SSSHDPLLKL  180
TVDGACMNVG GSTNVSFPDE DIMFNPVECK ISDMEKAMML RAAMNAKEQL LKLLAANEPL  240
WIKSSTDRRF VLHPENYEEL FPRANHFENS KGRVESSKGS RIVRIKAMQL VDMLLDSRKW  300
TNLFPTIITK ARTLEVLENG SLENRSGALL LMHGEMHVLS PLVPSREFFI VRYCEQVEAG  360
IWMVADVSVE YMKENNPNLS FWKLPSGCMI HEISNGSCQV FWVEHVELDE NVQTHQLYRD  420
LINGSIAYGA ERWLMELQRM CERFTSAESE YIPDYDTGVI TLPEGRRSMM RLSHRMVKNF  480
CAILNMSNKM DFPQHLAEEN SGVRISVRKS RNPGHPISAM FIITAAISFW LPLPSKNLYD  540
FFRDPTNRVK WDALCYGNPV REIARIATGS HPSNYVSIIR LVNPNQNGVA IIQESFIDPL  600
GSYVVYSPIN ISDIERIING EDSALVSVLP SGIVISEDEQ SIANARASSS GDGDKSTRGS  660
LITVAFQILM CNPAAMNLES VAAVNSLITS TVHNVKDALL SDYHLMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein