PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338318.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 614aa    MW: 68999.2 Da    PI: 5.9531
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.52.2e-182878656
                    S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    ++t +q  +Le++Fe++++p++++r +LAk+l+L+ +q+k+WFqN+R+  k
  XP_027338318.1 28 NLTFDQQGQLEAFFERCPNPDETQRDQLAKELELEPKQIKYWFQNKRTETK 78
                    67889999***************************************9876 PP
2START117.32.2e-371363555206
                     HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                     +aa+e++++ ++e  +W kss      ++++ + + f++ +        + e +r+s++v   +++lve +ld+  +W ++++    kaet+ev+
  XP_027338318.1 136 TAAMEELLRLTSEPFLWAKSSddvgFVLIRERYAKMFPKVNDslegpdTHEESSRDSKIVRIGAMQLVEMFLDSD-KWVNYFTpivsKAETVEVL 229
                     5778888889999999**9998887778999999999887668999999**************************.******************* PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173
                     + g      ga q+m+ e+  lspl p R f f+Ry++  g g+w+i+dvS+ds        +   a++lpSg++i++++ng s vtwvehv ++
  XP_027338318.1 230 DAGsltnrnGAMQVMYEEMHILSPLLPsRTFFFLRYCQVVGVGVWAIADVSLDSFGGHV---PHCSARRLPSGCIIHQLPNGSSMVTWVEHVKVN 321
                     ****************************************************9977655...3455669************************** PP

                     SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 174 grlp.hwllrslvksglaegaktwvatlqrqcek 206
                     +r+  + l+r l+ + +a gak+w+ +lqr ce+
  XP_027338318.1 322 DRMQtSPLYRDLLCNNIAYGAKRWLLALQRTCER 355
                     ***9899*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MDFSMESSQG FNKDQDSQKF NEEKPSYNLT FDQQGQLEAF FERCPNPDET QRDQLAKELE  60
LEPKQIKYWF QNKRTETKMS LPASQAPTLE EVNQENNNCD SDQADATLND NGICDPMSGS  120
EESPEMEKAQ ILKVATAAME ELLRLTSEPF LWAKSSDDVG FVLIRERYAK MFPKVNDSLE  180
GPDTHEESSR DSKIVRIGAM QLVEMFLDSD KWVNYFTPIV SKAETVEVLD AGSLTNRNGA  240
MQVMYEEMHI LSPLLPSRTF FFLRYCQVVG VGVWAIADVS LDSFGGHVPH CSARRLPSGC  300
IIHQLPNGSS MVTWVEHVKV NDRMQTSPLY RDLLCNNIAY GAKRWLLALQ RTCERFACTS  360
SIENSPIHDA ERAIMSIEGR KCVINLSNRM VQSFCKILKS RKQDSTPFLE ENKNEIKVSI  420
RMNTTPGQPH GFVATAITSI SLPVPPHNIF RFLNSTKRRH KWDVLCCENR AAEIAYISIG  480
GANAANHISF IQTLNARESN VLVFQESYID SLGSYVVYAP IDVTNARRIV NGEGSMVHIL  540
PSGFLISGDG REVAETSNGG NANRSRGSLL TIGYQILISS KPKTRHQNME TMELTSRLVI  600
SIVEKIKNAL KCSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17320.11e-106HD-ZIP family protein