PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338352.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 227aa MW: 25767.5 Da PI: 8.7514

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	81	135	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F+ + +++ +++ LA++l+L+ rqV vWFqNrRa+ k XP_027338352.1 81 RKKLKLTKEQSATLENNFKLHTTLNLVQKQALAEQLNLKHRQVEVWFQNRRARTK 135 788899***********************************************98 PP
2	HD-ZIP_I/II	108.1	6.5e-35	81	169	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk++l+keq+++LE++F+ +++L+ +K++la++L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eLr + XP_027338352.1 81 RKKLKLTKEQSATLENNFKLHTTLNLVQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCKKLSEENQRLKKELQELR-A 169 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MEDDEACITS LSLGLGLEGY VPKKEKQNIN KPLPCLDLTI ELCPKGEAIE VDQQHHKAEG 60 SILKDPNERS PENNNRYNGS RKKLKLTKEQ SATLENNFKL HTTLNLVQKQ ALAEQLNLKH 120 RQVEVWFQNR RARTKLKQTE VDCEFLKKCC KKLSEENQRL KKELQELRAL KVGPSPLHIQ 180 LSKATTLTLC SSCEGLLKPN EGNKATVSDV VRNNHHKLQS SIELEGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	138	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	1e-51	HD-ZIP family protein