PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338411.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 567aa MW: 63130.8 Da PI: 6.6528

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00087	474	496	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H XP_027338411.1 474 HECPICLKVFPSGQALGGHKRSH 496 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MINPMEEDQE VKHVCKFCSK SFPCGRSLGG HMRSHVTNAS TENEEKVSAP TIRKLSSFNS 60 NGGDTCEAGV NNGGYGLREN PKKTWRFTDS SEDTAVLDKF CKECGKGFHS WKALFGHMKC 120 HSDRERVTQN NTFLDDQDSW TNNNNNGSHK MVLELESQSE NEASAPNRRR RSKRRRTRYM 180 DPSTSSISFV SEAEQEQEEV AMSLMMLSRD LSPWCGLNSV AESSGNNSMH FELEGPSLVP 240 KVEGKRVISS GSEMAKKVTK PRDMKWEFGN SAASNLNSKG KKSSELLATE CPENGFGVNK 300 TKDIGNEFIR NGKDKKPELE LDSQFEFEDN GTEFSNSKYT SIKAKLLDSE MKSSSLKSWA 360 NKTSEAEFSK SSHKRGKFEC TTCNKIFQSY QALGGHRASH KKIKGCFASK NASSENSTEL 420 EADLSPDPTT ESKLMKNNNT IDNNENVEEH EMVTTIGFDN EEDTVRGSKK SKGHECPICL 480 KVFPSGQALG GHKRSHLAGG SESTRNCQSQ TIVLEEATPE IRDFFDLNLP ASTEEDSNSH 540 NHAEPYRTWW VVGGNNKQEA LVGLMSN

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MINPMEEDQE VKHVCKFCSK SFPCGRSLGG HMRSHVTNAS TENEEKVSAP TIRKLSSFNS  60
NGGDTCEAGV NNGGYGLREN PKKTWRFTDS SEDTAVLDKF CKECGKGFHS WKALFGHMKC  120
HSDRERVTQN NTFLDDQDSW TNNNNNGSHK MVLELESQSE NEASAPNRRR RSKRRRTRYM  180
DPSTSSISFV SEAEQEQEEV AMSLMMLSRD LSPWCGLNSV AESSGNNSMH FELEGPSLVP  240
KVEGKRVISS GSEMAKKVTK PRDMKWEFGN SAASNLNSKG KKSSELLATE CPENGFGVNK  300
TKDIGNEFIR NGKDKKPELE LDSQFEFEDN GTEFSNSKYT SIKAKLLDSE MKSSSLKSWA  360
NKTSEAEFSK SSHKRGKFEC TTCNKIFQSY QALGGHRASH KKIKGCFASK NASSENSTEL  420
EADLSPDPTT ESKLMKNNNT IDNNENVEEH EMVTTIGFDN EEDTVRGSKK SKGHECPICL  480
KVFPSGQALG GHKRSHLAGG SESTRNCQSQ TIVLEEATPE IRDFFDLNLP ASTEEDSNSH  540
NHAEPYRTWW VVGGNNKQEA LVGLMSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	7e-35	C2H2 family protein