PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338543.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 299aa MW: 33988.9 Da PI: 4.9725

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.2	2.8e-15	21	112	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+++ +L++a ++ +l+rg+l++++W++v++++ + ++ +r+ +qCk++++ ++k+yk +k++ ++ + ss++p+f++l+a XP_027338543.1 21 CWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGALSSSWPFFERLDA 112 7**************************************99999************************99989999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MPDFHDSLAP PSRPVPVRED CWSEEASSTL VDAWGRRYLE LNRGNLRQKD WQDVADAVNA 60 LHGHTKKTHR TDVQCKNRID TIKKKYKIEK ARVSSSNGAL SSSWPFFERL DALIGPNFNA 120 KKPTSSPSPS PPVALPLLPH RKNPSSHAIA VPPTAIALPQ KRSAAVAMDE GYFRRNYSAM 180 AAAAAAAEAD EEEEEEEEEE EEELEEEEED EDEGRGSEVE EGEKEREGMR RLAKAIEKFG 240 EVYERVEGQK LRQMVDLEKQ RMQFAKDLEV QRMQMFMDTQ IQLGRIKRAK RSGSNDMYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	4e-43	Trihelix family protein