PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338613.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 188aa MW: 21879.9 Da PI: 8.9671

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	1e-15	20	66	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W+ eEd++l ++v+ +G g+W+ +r+ g++R++k ck rw++yl XP_027338613.1 20 RAWSSEEDDILMKYVEVHGEGNWSDLPRRAGLNRCGKCCKVRWLNYL 66 68*******************************************97 PP
2	Myb_DNA-binding	40.1	8.3e-13	74	116	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + + +E+el+++++k+lG++ W+ Ia +++ gRt+ ++ ++w+ y XP_027338613.1 74 NISSDEEELIIKLHKLLGNR-WSIIAGRLP-GRTETEIENFWNIY 116 6689**************.*****.*********966 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MHSHHREKSK IMETCGEKKR AWSSEEDDIL MKYVEVHGEG NWSDLPRRAG LNRCGKCCKV 60 RWLNYLKPAI DRRNISSDEE ELIIKLHKLL GNRWSIIAGR LPGRTETEIE NFWNIYLSKK 120 VEEMQENNKF PSTTTTTNSS VQSPNCTKSS LDFYPSEFSH PVIKPKAVRL TKPIMPTQIG 180 WDNQNLYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	7e-38	MYB family protein