PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338655.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 353aa MW: 39460.4 Da PI: 5.2434

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_027338655.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.4	9.3e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_027338655.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPATHKPLL NNEDHQIKEE KESTDTPPPM LMPVSQGLLA SCQGSPLVMN NSKYYDGGLT 180 VKEASSEVFM SKPALDPLSY FEFQMGVADQ CGYDSSLNQA GTNSSYGFSS MPCLDSSDHG 240 HVSVGEFSDN NSCSKISSFL MKESSSNSSS MSVYAGCQMS SMMENAGFSW DGENKLDPLL 300 QFQVNAVKSE EFKTGSWQEA QMLSQNSIDF TNYSLMSLSE DLTGANFDVF QQI

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG  120
IDPATHKPLL NNEDHQIKEE KESTDTPPPM LMPVSQGLLA SCQGSPLVMN NSKYYDGGLT  180
VKEASSEVFM SKPALDPLSY FEFQMGVADQ CGYDSSLNQA GTNSSYGFSS MPCLDSSDHG  240
HVSVGEFSDN NSCSKISSFL MKESSSNSSS MSVYAGCQMS SMMENAGFSW DGENKLDPLL  300
QFQVNAVKSE EFKTGSWQEA QMLSQNSIDF TNYSLMSLSE DLTGANFDVF QQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-83	MYB family protein