PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338717.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 338aa MW: 38205.1 Da PI: 7.2252

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.2	7.8e-07	177	196	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C+k+F+r nL+ H+ XP_027338717.1 177 FPCPVCSKTFNRYNNLQMHM 196 89*****************9 PP
2	zf-C2H2	13.4	0.00023	261	283	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +C+k F k + ++H +++ XP_027338717.1 261 YMCRKCSKAFAVKGDWRTHEKNC 283 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MTDPHSNLFH EWFNFMLLHP HYYSSSQPYP LGNYSNNRFG IQLHEASSSS YAAPPPPSPP 60 LREALPLINK ISLPNQQQNE PSNIIEAENN KDESLLQLTA TAEEGDDETV TVALHIGLPR 120 MDTSSSDLGS SRVVSTCMEM GEKEEVNIIS EQPLDRLNKG QYWIPTPSQI LIGPTQFPCP 180 VCSKTFNRYN NLQMHMWGHG SQYRKGPDSL KGTQPTAMLR LPCFCCAPGC KHNIDHPRAR 240 PLKDFRTLQT HYKRKHGIKP YMCRKCSKAF AVKGDWRTHE KNCGKVWYCL CGSDFKHKRS 300 LKDHIKAFGY GHGAFGIDCL QEEDEAASEI EHDGESSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-124	C2H2 family protein