PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338736.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 274aa MW: 32322.6 Da PI: 8.0802

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89.3	4.3e-28	163	247	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev+aLi++r+++e+++r +k+ Wee+ ++m+ g++rs+k+Ckekwen+nk+y+++ + kkr ++s+tcpyfd+l+ XP_027338736.1 163 RWPDVEVQALITVRTSLEHKFRVMGSKGSIWEEIREAMHGMGYNRSAKKCKEKWENINKYYRRTIGSGKKR-RQNSKTCPYFDELD 247 8**************************************************************999998.78889*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MLIMIGFRER MRESPQLLTT FSSFEGEDED DDSSASTKEL GSRKRRRKTV RKLEDFVKDL 60 VTKVMEKQEQ MHKQLVEMIE NKERERIKRE EAWKHEEMER IRKDEEARAQ EKTRNLALIS 120 FIQNLLGHEI QIPEHVEACS KREEDEVQVN VGKDLNSDAS SNRWPDVEVQ ALITVRTSLE 180 HKFRVMGSKG SIWEEIREAM HGMGYNRSAK KCKEKWENIN KYYRRTIGSG KKRRQNSKTC 240 PYFDELDILY RNGLLNLGNA LSNTNDVPKI EEKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	47	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	5e-47	Trihelix family protein