PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338900.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 235aa    MW: 27621.9 Da    PI: 6.7902
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81e-193890456
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++f++eq++ Le  Fe+++++  +++ +LA+ lgL+ rqV +WFqNrRa++k
  XP_027338900.1 38 KRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWK 90
                    568*************************************************9 PP
2HD-ZIP_I/II1231.4e-3936128193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     e+krr+s+eq+++LE  Fe+e+kLep++K++lar+Lglqprqva+WFqnrRAR+k+k++E++y++Lk++yd+l+++ e+L++e+e+L++el++
  XP_027338900.1  36 ENKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKEEKESLQQELHK 128
                     58***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MMEGDENIQA SKGKNVESFT CLEPPQNPRK KNKKIENKRR FSDEQIRSLE CIFESESKLE  60
PRKKMQLARD LGLQPRQVAI WFQNRRARWK SKRIEQEYRK LKDEYDNLAS RFESLKEEKE  120
SLQQELHKLS DLMEISRDGR RDDKVAKENS IEDGGSGSGY SSWRPEEAKP CFSNDKNENR  180
IIRAEKSEDK GHQLLRMDDH AEMPLASLEK WYSSVDPSGI LDQSCSSSQW LDFWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.15e-37HD-ZIP family protein