PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338954.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 187aa MW: 20648.3 Da PI: 7.7287

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	138.5	2.3e-43	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++re+a++sl+yeAear+rdPvyG+vg i+ lq+q+++l+ el+ XP_027338954.1 10 PCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREHAVTSLAYEAEARVRDPVYGCVGDISVLQRQVQRLQRELD 104 7*********************************************************************************************9 PP DUF260 96 llke 99 ++++ XP_027338954.1 105 SANA 108 8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MASSSSYNSP CAACKFLRRK CLPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKLLNELLP 60 HQREHAVTSL AYEAEARVRD PVYGCVGDIS VLQRQVQRLQ RELDSANADL LRYACNEIPP 120 PSLPVPPAMT TSIQQMPQRS FSARFGNEGS GFYRPSPTTY SFPYSLPWTD TPSDDNNERG 180 CGGGGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	1e-62	LBD family protein