PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339022.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 1554aa MW: 175175 Da PI: 8.9785

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	1438	1463	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L++H r+ + XP_027339022.1 1438 YRCDieGCTMSFGSKQELVHHKRNiC 1463 99********************9877 PP
2	zf-C2H2	12.8	0.00035	1463	1485	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_027339022.1 1463 CPvkGCGKKFFSHKYLVQHRRVH 1485 9999*****************99 PP
3	zf-C2H2	11.8	0.00076	1521	1547	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_027339022.1 1521 YVCAepGCGQTFRFVSDFSRHKRKtgH 1547 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1554 aa Download sequence
MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP 60 KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVQRPV WQSGDHYTFH EFESKAKSFE 120 KTYLKRHTKK GQGPGPLETE ALFWKATLDK PFSVEYANDM PGSAFSPKCP EAGDPGSSLA 180 DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA 240 GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV 300 QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMISHFQL 360 LYDLALALCS RIPASIGTEP RSSRLKDKKK GEGETVIKEL FVQDVLQNND LLHILGKESA 420 VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EELNSSKGFV SDDLVFNRSH GIKQEKSFYS 480 VKDKFSTLCE RNKISSFDVN GNICASTYAL QRETERETSQ GDGFSDRRLF SCVTCGILSF 540 SSVAIVQPKE PAARYLMSAD CSFFNDWVVG SGVSSSKFTI AHEDTTIPEP NSYTGWMKKN 600 AQDGLGAFPV QSAQDASNTE IEKGNTALAL LASAYGNSDS EEDQGDPDIA VDSHESNVIN 660 SNSGRLLSLT PDSHASPMTA LDRVDDISSK SANYEDHMHH RFESILSHDS FDHSSKKQDY 720 DVTSGYTFKN IRTVPNSTSN CSQDSHDAER SLSVNPVVPI DNRSASLVPQ SDEDSSRMHI 780 FCLEHAVEAE LQLRPIGGAH IFLLCHPDYP KIEAEAKLVA EDLGIDYTWK NIAYRHATKE 840 DEERIQSALD SEEAIPGNGD WAVKLGINLF YSANLSRSPL YSKQMPYNSV IYYAFGRSSP 900 TSSPIEPKVY QRRASKQKKV VAGKWCGKVW MSNQIHPLLA TKDSDDVEDE KKLHGWILPD 960 EKIERPESTP KSETTSRKSG RKRKMTLESA RTRKGSFAKK NIASDNSTED KPISQPRRIL 1020 RSKKARCVVR HRAALEGDYG PPRHHRKHRS KQTKCSESDA ASDDSLNDNV RKTKFIENDV 1080 VSNDTVDYDS DWQQREELCG KQVEDTEREA ISEDSMGVGS LQLHRKASKG KHAKYISADI 1140 MISDDQLEPK MQKQQRRNPK SRQAKYLAEE EIVSDDQLEG YYRKYQRRAP KGRQAKCLAG 1200 EDEMSDDQSE DNFQRQQTSF SRKRQYKGID REVKNVISDD QLLDHFQKQQ RKFPKSRQNK 1260 HIDEEVMDDS ADNNSHLLRR TPKRKQAKCM DEDDINSDDE MEDDSHQPPM RALRSKQSKA 1320 KTLQQMKQAK SLQVKNRTSQ PVKRGARGLM KSKAPQQIKQ PSHLRNKQSS NSREFSLYME 1380 EEEEGGPSTR LRKRSTKAQE SEGKLKDKQT KRKRVKNATA AAKVSAGHAK VKDEEAEYRC 1440 DIEGCTMSFG SKQELVHHKR NICPVKGCGK KFFSHKYLVQ HRRVHEDDRP LKCPWKGCKM 1500 TFKWAWARTE HIRVHTGARP YVCAEPGCGQ TFRFVSDFSR HKRKTGHSAK KSRQ

Sequence ? help Back to Top

Protein Sequence Length: 1554 aa Download sequence

MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP  60
KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVQRPV WQSGDHYTFH EFESKAKSFE  120
KTYLKRHTKK GQGPGPLETE ALFWKATLDK PFSVEYANDM PGSAFSPKCP EAGDPGSSLA  180
DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA  240
GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV  300
QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMISHFQL  360
LYDLALALCS RIPASIGTEP RSSRLKDKKK GEGETVIKEL FVQDVLQNND LLHILGKESA  420
VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EELNSSKGFV SDDLVFNRSH GIKQEKSFYS  480
VKDKFSTLCE RNKISSFDVN GNICASTYAL QRETERETSQ GDGFSDRRLF SCVTCGILSF  540
SSVAIVQPKE PAARYLMSAD CSFFNDWVVG SGVSSSKFTI AHEDTTIPEP NSYTGWMKKN  600
AQDGLGAFPV QSAQDASNTE IEKGNTALAL LASAYGNSDS EEDQGDPDIA VDSHESNVIN  660
SNSGRLLSLT PDSHASPMTA LDRVDDISSK SANYEDHMHH RFESILSHDS FDHSSKKQDY  720
DVTSGYTFKN IRTVPNSTSN CSQDSHDAER SLSVNPVVPI DNRSASLVPQ SDEDSSRMHI  780
FCLEHAVEAE LQLRPIGGAH IFLLCHPDYP KIEAEAKLVA EDLGIDYTWK NIAYRHATKE  840
DEERIQSALD SEEAIPGNGD WAVKLGINLF YSANLSRSPL YSKQMPYNSV IYYAFGRSSP  900
TSSPIEPKVY QRRASKQKKV VAGKWCGKVW MSNQIHPLLA TKDSDDVEDE KKLHGWILPD  960
EKIERPESTP KSETTSRKSG RKRKMTLESA RTRKGSFAKK NIASDNSTED KPISQPRRIL  1020
RSKKARCVVR HRAALEGDYG PPRHHRKHRS KQTKCSESDA ASDDSLNDNV RKTKFIENDV  1080
VSNDTVDYDS DWQQREELCG KQVEDTEREA ISEDSMGVGS LQLHRKASKG KHAKYISADI  1140
MISDDQLEPK MQKQQRRNPK SRQAKYLAEE EIVSDDQLEG YYRKYQRRAP KGRQAKCLAG  1200
EDEMSDDQSE DNFQRQQTSF SRKRQYKGID REVKNVISDD QLLDHFQKQQ RKFPKSRQNK  1260
HIDEEVMDDS ADNNSHLLRR TPKRKQAKCM DEDDINSDDE MEDDSHQPPM RALRSKQSKA  1320
KTLQQMKQAK SLQVKNRTSQ PVKRGARGLM KSKAPQQIKQ PSHLRNKQSS NSREFSLYME  1380
EEEEGGPSTR LRKRSTKAQE SEGKLKDKQT KRKRVKNATA AAKVSAGHAK VKDEEAEYRC  1440
DIEGCTMSFG SKQELVHHKR NICPVKGCGK KFFSHKYLVQ HRRVHEDDRP LKCPWKGCKM  1500
TFKWAWARTE HIRVHTGARP YVCAEPGCGQ TFRFVSDFSR HKRKTGHSAK KSRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1279	1285	RRTPKRK
2	1279	1286	RRTPKRKQ
3	1392	1414	RKRSTKAQESEGKLKDKQTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein