PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339183.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 27720.7 Da    PI: 10.1194
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.83.7e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+e+ss
  XP_027339183.1  9 KRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSTKGKLFEFSS 59
                    79***********************************************96 PP
2K-box105.66e-35761742100
           K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     ++++ + +++ ++ +++ e+akLk+++e Lq++qR+++GedL+sLs+keLq+Le+qL+++lk+iRs+Kn+l++e+i++l kk k+lqe+n++L k
  XP_027339183.1  76 AERQLVTNNQPQNGNWTLEHAKLKARLEVLQKNQRNFMGEDLDSLSIKELQNLEHQLDSALKHIRSRKNQLMYESISQLHKKDKALQEQNNTLAK 170
                     66777788899999********************************************************************************* PP

           K-box  97 klee 100
                     k++e
  XP_027339183.1 171 KIKE 174
                     *987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KANEISVLCD AEVALIVFST KGKLFEFSSD  60
PCMERILERY ERYSYAERQL VTNNQPQNGN WTLEHAKLKA RLEVLQKNQR NFMGEDLDSL  120
SIKELQNLEH QLDSALKHIR SRKNQLMYES ISQLHKKDKA LQEQNNTLAK KIKEKEKTLA  180
QQAQEQQNKN VDLTSAVLVP QPLETLNIGG SPETRGNGGN IDGTSTPAQV TLLPPWMLGP  240
TKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-113MIKC_MADS family protein