PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339309.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 328aa MW: 37028.6 Da PI: 8.0132

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.1	8.7e-25	44	87	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_027339309.1 44 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 87 79***************************************987 PP
2	QLQ	39.2	2.2e-14	8	29	2	23
QLQ 2 aFTaaQlqlLksQilAyKyLaa 23 +FT++Q+q+L++Q+l++Ky+a+ XP_027339309.1 8 PFTPSQWQELEHQALIFKYMAS 29 8*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MNGRNRFPFT PSQWQELEHQ ALIFKYMASV GWNYLQMGLG RKIDPEPGRC RRTDGKKWRC 60 SKEAYPDSKY CERHMHRGKN RSRKPVEVLK TTTNSNTNAS STPAISSITK NTPTTTHSLS 120 SETHHHPPQH SCYGSSFFYH HPTSRSSGIG LSFEDNSAPL FLDTGSCSQS NTDCRSRYVY 180 GEKEEVDEHA FFTEPCGNMK SFTASSMDDS WQLRPLTMSS SSSSSKQRSC SSLSNDYSYL 240 QLHSKQEQDQ GCYMFGSGGD GDETLIKHGK EPQKTIHRFF DEWPHKGRGG SWLDLDDKSS 300 TTQLSISIPT SSHDFPTFSS SSRSHHDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	9e-38	GRF family protein