PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339320.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 435aa MW: 48527.7 Da PI: 8.232

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.9	4.9e-29	187	245	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrC++ Cpv+k+v+r+ +d++v+++tYeg+Hnh+ XP_027339320.1 187 GDGCQWRKYGQKTAKGNPCPRAYYRCSMGtACPVRKQVQRCFKDETVLITTYEGNHNHP 245 69************************98**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MEEKVGIKKL LEDEERPCDK LSVHNSMGST LLSLSLNNSE QKTHRIEGQS QTQMGMLRIK 60 LEEAKKENEI LRAMLHQVNE HCTTLQNRIL LAMQQHQLSS ASPRNSNHDL QRDREGAEKA 120 MFTRQFLNIG EKKVGRNIVD DEYNVEGEIN SQITSKEPKR SEDQASEVPC RKARVSIRAR 180 SDFSMMGDGC QWRKYGQKTA KGNPCPRAYY RCSMGTACPV RKQVQRCFKD ETVLITTYEG 240 NHNHPLPPAA RPMASSTSAA LNTFLSGSIT SSHTISTLSN SHLFSSLSSI SPTALATFSP 300 SATCPTVTLD LTQPTTNNYL QFQRATTSHD QRQSFFPLPL DGHPQTYEEL HLCSKLPTFI 360 TPEKSLALVD VVSEVMVKDP SLKAALFAAI SSLTGDHPHN NNINNNNQDN KSSGHDPCSK 420 MPAIPRHHPY TTQLI

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MEEKVGIKKL LEDEERPCDK LSVHNSMGST LLSLSLNNSE QKTHRIEGQS QTQMGMLRIK  60
LEEAKKENEI LRAMLHQVNE HCTTLQNRIL LAMQQHQLSS ASPRNSNHDL QRDREGAEKA  120
MFTRQFLNIG EKKVGRNIVD DEYNVEGEIN SQITSKEPKR SEDQASEVPC RKARVSIRAR  180
SDFSMMGDGC QWRKYGQKTA KGNPCPRAYY RCSMGTACPV RKQVQRCFKD ETVLITTYEG  240
NHNHPLPPAA RPMASSTSAA LNTFLSGSIT SSHTISTLSN SHLFSSLSSI SPTALATFSP  300
SATCPTVTLD LTQPTTNNYL QFQRATTSHD QRQSFFPLPL DGHPQTYEEL HLCSKLPTFI  360
TPEKSLALVD VVSEVMVKDP SLKAALFAAI SSLTGDHPHN NNINNNNQDN KSSGHDPCSK  420
MPAIPRHHPY TTQLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	5e-56	WRKY family protein